BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G08SP1|AL428276
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig978 1526 0.0
>3x_Contig978
Length = 3477
Score = 1526 bits (757), Expect = 0.0
Identities = 783/805 (97%)
Strand = Plus / Plus
Query: 1 gatcacttcccttttaatggtacccaattgacgtattcatatcctgttctgcccattatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gatcacttcccttttaatggtacccaattgacgtattcatatcctgttctgcccattatg 896
Query: 61 acgctccaaaattaatttatttttgatacctatttctcaaaattaaatagttactttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 acgctccaaaattaatttatttttgatacctatttctcaaaattaaatagttactttttc 956
Query: 121 tggcgtyactcatgcaccaggctcctcatcatcccatacgaccttcggtcccttatyaty 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 957 tggcgtcactcatgcaccaggctcctcatcatcccatacgaccttcggtcccttatcatc 1016
Query: 181 gattccttgaccaacacacaattaatgatcaactctcgatccgaaccttttttatatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gattccttgaccaacacacaattaatgatcaactctcgatccgaaccttttttatatata 1076
Query: 241 catgtyagtattgaaaacataaaatgtgcatccatttaatagttgttggtccaatctaac 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 catgtcagtattgaaaacataaaatgtgcatccatttaatagttgttggtccaatctaac 1136
Query: 301 cattgtgatataggctcgtgacaagtggacctaatctggaatagttgtttggcaacgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 cattgtgatataggctcgtgacaagtggacctaatctggaatagttgtttggcaacgcaa 1196
Query: 361 taataaagaaagtatctttgggagattattcaatatatcggcatgggtgaatatagagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 taataaagaaagtatctttgggagattattcaatatatcggcatgggtgaatatagagta 1256
Query: 421 agtactggaagaggaggcgcaggaaacatgataacgtcgaacgagaaaccttcaccgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 agtactggaagaggaggcgcaggaaacatgataacgtcgaacgagaaaccttcaccgaag 1316
Query: 481 ttkgtkacacagggttcccagacccccaatatactatcgccaatttactctacgggtcgc 540
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 gttgtgacacagggttcccagacccccaatatactatcgccaatttactctacgggtcgc 1376
Query: 541 ggtggtgctggtaatatgaggaggaatgtggacccggttatgacacgcaccgcacaggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 ggtggtgctggtaatatgaggaggaatgtggacccggttatgacacgcaccgcacaggat 1436
Query: 601 gttgacgatgacgacgtgatakacgtkacttcttcaaacaatacaggaaccatcaaaaak 660
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 1437 gttgacgatgacgacgtgatagacgtgacttcttcaaacaatacaggaaccatcaaaaag 1496
Query: 661 atcaaktckakackcttctckkwacctccaaakaccatatckatckgtagaggtggtgct 720
||||| || | || |||||| ||||||||| |||||||| ||| ||||||||||||||
Sbjct: 1497 atcaagtcgagacgcttctcggaacctccaaagaccatatcgatcggtagaggtggtgct 1556
Query: 721 gggaacatactaagccctaaatcgtcaagaaagaaaagggatgagaagggctctaagatt 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1557 gggaacatactaagccctaaatcgtcaagaaagaaaagggatgagaagggctctaagaat 1616
Query: 781 tcctccactggagacaacggwtcga 805
|||||||||||||||||||| ||||
Sbjct: 1617 tcctccactggagacaacggatcga 1641
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5101
Number of Sequences: 1807
Number of extensions: 5101
Number of successful extensions: 118
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)